Transcript: ENST00000598519.2 ZNF628-202

Description

zinc finger protein 628 [Source:HGNC Symbol;Acc:HGNC:28054]

Gene Synonyms

ZEC, ZFP628

Location

Chromosome 19: 55,476,617-55,484,487 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 105 domains and features, is associated with 5084 variant alleles and maps to 310 oligo probes.

Gene

This transcript is a product of gene ENSG00000197483.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000598519.2	ZNF628-202	3562	1059aa	ENSP00000469591.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33116	Q5EBL2	NM_033113.3	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000591164.1	ZNF628-201	472	101aa	ENSP00000465905.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EL41	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 3,562 bps, Translation length: 1,059 residues

MANE

This MANE Select transcript contains ENSP00000469591 and matches to NM_033113.3 and NP_149104.3

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5EBL2

CCDS

This transcript is a member of the Human CCDS set: CCDS33116

Transcript Support Level (TSL)

TSL:1

Version

ENST00000598519.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000598519.2 ZNF628-202

Summary

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Transcript: ENST00000598519.2 ZNF628-202

Summary

About Us

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