Human (GRCh38.p14)
Description

TATA-box binding protein associated factor, RNA polymerase I subunit C [Source:HGNC Symbol;Acc:HGNC:11534]

Gene Synonyms

MGC:39976, SL1, TAFI110, TAFI95

Location
About this transcript

This transcript has 5 exons, is annotated with 1 domain and feature, is associated with 2481 variant alleles and maps to 150 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000566732.6TAF1C-2163847843aaENSP00000455933.1
 
Protein coding
CCDS58489Q15572-6 NM_001243156.2MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P2TSL:2
ENST00000567759.5TAF1C-2183879869aaENSP00000455265.1
 
Protein coding
CCDS32496Q15572-1 -GENCODE basicAPPRIS ALT2TSL:2
ENST00000341690.10TAF1C-2013678775aaENSP00000345305.6
 
Protein coding
CCDS45535Q15572-2 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000541676.5TAF1C-2033502537aaENSP00000437900.2
 
Protein coding
CCDS58488Q15572-4 -GENCODE basicAPPRIS ALT2TSL:2
ENST00000570117.5TAF1C-2222349537aaENSP00000455247.1
 
Protein coding
CCDS58488Q15572-4 -GENCODE basicAPPRIS ALT2TSL:2
ENST00000568265.1TAF1C-2191140380aaENSP00000456101.1
 
Protein coding
H3BR71 -TSL:4CDS 5' and 3' incomplete
ENST00000564345.5TAF1C-210602146aaENSP00000454854.1
 
Protein coding
H3BNH3 -TSL:4CDS 3' incomplete
ENST00000561955.1TAF1C-20557093aaENSP00000456011.1
 
Protein coding
H3BQZ8 -TSL:4CDS 3' incomplete
ENST00000564454.1TAF1C-211555136aaENSP00000457883.1
 
Protein coding
H3BUZ7 -TSL:4CDS 3' incomplete
ENST00000566903.5TAF1C-2172628209aaENSP00000456133.1
 
Nonsense mediated decay
H3BR91 -TSL:5
ENST00000563428.5TAF1C-208253158aaENSP00000455787.1
 
Nonsense mediated decay
H3BQH8 -TSL:2
ENST00000569505.5TAF1C-22056470aaENSP00000457281.1
 
Nonsense mediated decay
H3BTQ6 -TSL:3
ENST00000569609.5TAF1C-22155552aaENSP00000454494.1
 
Nonsense mediated decay
H3BMQ4 -TSL:4
ENST00000565544.1TAF1C-214578No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000564774.5TAF1C-2124637No protein-
 
Retained intron
--TSL:2
ENST00000564208.5TAF1C-2093810No protein-
 
Retained intron
--TSL:2
ENST00000544090.5TAF1C-2042747No protein-
 
Retained intron
--TSL:2
ENST00000537450.5TAF1C-2021318No protein-
 
Retained intron
--TSL:2
ENST00000562330.5TAF1C-2061044No protein-
 
Retained intron
--TSL:3
ENST00000565279.5TAF1C-213912No protein-
 
Retained intron
--TSL:5
ENST00000570270.1TAF1C-223597No protein-
 
Retained intron
--TSL:3
ENST00000566183.1TAF1C-215290No protein-
 
Retained intron
--TSL:3
ENST00000562445.5TAF1C-207259No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 5, Coding exons: 2, Transcript length: 555 bps, Translation length: 52 residues

Transcript Support Level (TSL)

TSL:4

Version

ENST00000569609.5

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.