Human (GRCh38.p14)
Description

protein tyrosine phosphatase non-receptor type 21 [Source:HGNC Symbol;Acc:HGNC:9651]

Gene Synonyms

PTPD1, PTPRL10

Location
About this transcript

This transcript has 19 exons, is annotated with 47 domains and features, is associated with 39804 variant alleles and maps to 979 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000556564.6PTPN21-20864431174aaENSP00000452414.1
 
Protein coding
CCDS9884Q16825 NM_007039.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000328736.7PTPN21-20160891174aaENSP00000330276.3
 
Protein coding
CCDS9884Q16825 -GENCODE basicAPPRIS P1TSL:1
ENST00000555243.1PTPN21-2071014195aaENSP00000451401.1
 
Protein coding
G3V3S6 -TSL:5CDS 3' incomplete
ENST00000553531.1PTPN21-203704128aaENSP00000450847.1
 
Protein coding
H0YJ59 -TSL:3CDS 5' incomplete
ENST00000536337.5PTPN21-202394361aaENSP00000443951.1
 
Nonsense mediated decay
G3V1Q9 -TSL:1
ENST00000554628.5PTPN21-2061571No protein-
 
Protein coding CDS not defined
--TSL:1
ENST00000554178.1PTPN21-204822No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000554270.5PTPN21-2054008No protein-
 
Retained intron
--TSL:1
ENST00000557249.1PTPN21-209576No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 19, Coding exons: 18, Transcript length: 6,443 bps, Translation length: 1,174 residues

MANE

This MANE Select transcript contains ENSP00000452414 and matches to NM_007039.4 and NP_008970.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q16825

CCDS

This transcript is a member of the Human CCDS set: CCDS9884

Transcript Support Level (TSL)

TSL:1

Version

ENST00000556564.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.