Human (GRCh38.p14)
Description

contactin 1 [Source:HGNC Symbol;Acc:HGNC:2171]

Gene Synonyms

F3, GP135

Location
About this transcript

This transcript has 16 exons, is annotated with 43 domains and features, is associated with 120464 variant alleles and maps to 416 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000551295.7CNTN1-20856671018aaENSP00000447006.1
 
Protein coding
CCDS8737Q12860-1 NM_001843.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P3TSL:1
ENST00000347616.5CNTN1-20155071018aaENSP00000325660.3
 
Protein coding
CCDS8737Q12860-1 -GENCODE basicAPPRIS P3TSL:1
ENST00000348761.2CNTN1-20233281007aaENSP00000261160.3
 
Protein coding
CCDS8738Q12860-2 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000547849.6CNTN1-2043282627aaENSP00000448653.1
 
Protein coding
CCDS58225Q12860-3 -GENCODE basicTSL:1
ENST00000547702.5CNTN1-2033033627aaENSP00000448004.1
 
Protein coding
CCDS58225Q12860-3 -GENCODE basicTSL:2
ENST00000552913.5CNTN1-21157272aaENSP00000449706.1
 
Protein coding
F8VX96 -TSL:4CDS 3' incomplete
ENST00000551424.5CNTN1-20955562aaENSP00000450412.1
 
Protein coding
F8VQW3 -TSL:3CDS 3' incomplete
ENST00000548005.5CNTN1-20555385aaENSP00000447862.1
 
Protein coding
F8VUI8 -TSL:4CDS 3' incomplete
ENST00000552248.5CNTN1-21046390aaENSP00000447860.1
 
Protein coding
F8VUI9 -TSL:3CDS 3' incomplete
ENST00000548481.1CNTN1-20651257aaENSP00000449517.1
 
Nonsense mediated decay
H0YIJ1 -TSL:3CDS 5' incomplete
ENST00000550305.1CNTN1-207731No protein-
 
Protein coding CDS not defined
--TSL:3
Statistics

Exons: 16, Coding exons: 15, Transcript length: 3,033 bps, Translation length: 627 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q12860

CCDS

This transcript is a member of the Human CCDS set: CCDS58225

Transcript Support Level (TSL)

TSL:2

Version

ENST00000547702.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.