Human (GRCh38.p14)
Description

C-type lectin domain containing 5A [Source:HGNC Symbol;Acc:HGNC:2054]

Gene Synonyms

CLECSF5, MDL-1

About this transcript

This transcript has 7 exons, is annotated with 19 domains and features, is associated with 8226 variant alleles and maps to 400 oligo probes.

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000546910.6CLEC5A-2063502188aaENSP00000449999.1
 
Protein coding
CCDS5870Q9NY25-1 NM_013252.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P4TSL:1
ENST00000551012.6CLEC5A-2071420165aaENSP00000446890.2
 
Protein coding
CCDS75670Q14DL9 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000438351.1CLEC5A-202743155aaENSP00000414897.1
 
Protein coding
C9JPR7 -GENCODE basicTSL:3
ENST00000439991.1CLEC5A-20350184aaENSP00000395258.1
 
Protein coding
C9JCE4 -GENCODE basicTSL:3
ENST00000418498.5CLEC5A-201155553aaENSP00000392561.1
 
Nonsense mediated decay
F8WCL0 -TSL:1
ENST00000470595.1CLEC5A-204400No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000481301.1CLEC5A-205578No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 7, Coding exons: 6, Transcript length: 3,502 bps, Translation length: 188 residues

MANE

This MANE Select transcript contains ENSP00000449999 and matches to NM_013252.3 and NP_037384.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NY25

CCDS

This transcript is a member of the Human CCDS set: CCDS5870

Transcript Support Level (TSL)

TSL:1

Version

ENST00000546910.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.