Human (GRCh38.p14)
Description

LIM and calponin homology domains 1 [Source:HGNC Symbol;Acc:HGNC:29191]

Gene Synonyms

DKFZP686A01247, LIMCH1A, LMO7B

Location
About this transcript

This transcript has 7 exons, is annotated with 10 domains and features, is associated with 104458 variant alleles and maps to 209 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000503057.6LIMCH1-20576971467aaENSP00000425631.1
 
Protein coding
CCDS82919G5EA03 NM_001330672.2MANE SelectEnsembl CanonicalGENCODE basicTSL:1
ENST00000313860.12LIMCH1-20161451083aaENSP00000316891.7
 
Protein coding
CCDS33977Q9UPQ0-1 -GENCODE basicAPPRIS P3TSL:1
ENST00000396595.7LIMCH1-2035740902aaENSP00000379840.3
 
Protein coding
CCDS47047Q9UPQ0-6 -GENCODE basicTSL:1
ENST00000381753.8LIMCH1-2025705890aaENSP00000371172.4
 
Protein coding
CCDS54765Q9UPQ0-9 -GENCODE basicTSL:1
ENST00000513024.5LIMCH1-2185129910aaENSP00000425222.1
 
Protein coding
CCDS75121Q9UPQ0-5 -GENCODE basicTSL:1
ENST00000512820.5LIMCH1-21650711069aaENSP00000424437.1
 
Protein coding
CCDS75119Q9UPQ0-4 -GENCODE basicTSL:1
ENST00000512946.5LIMCH1-21750571057aaENSP00000424645.1
 
Protein coding
CCDS54763Q9UPQ0-2 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000508501.5LIMCH1-20850541056aaENSP00000424825.1
 
Protein coding
CCDS54764Q9UPQ0-10 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000512632.5LIMCH1-2154792980aaENSP00000427045.1
 
Protein coding
CCDS87221D6RD46 -GENCODE basicTSL:1
ENST00000514096.5LIMCH1-2193543897aaENSP00000426334.1
 
Protein coding
E7EPK0 -GENCODE basicTSL:1
ENST00000509277.5LIMCH1-2093474916aaENSP00000422864.1
 
Protein coding
CCDS82920E9PDJ9 -GENCODE basicTSL:2
ENST00000511496.5LIMCH1-2133439897aaENSP00000421242.1
 
Protein coding
CCDS87222Q9UPQ0-8 -GENCODE basicTSL:1
ENST00000508466.1LIMCH1-2073051917aaENSP00000421656.1
 
Protein coding
H0Y8P3 -TSL:2CDS 5' incomplete
ENST00000509638.5LIMCH1-2111570153aaENSP00000427311.1
 
Protein coding
D6RJ93 -GENCODE basicTSL:1
ENST00000509454.5LIMCH1-2101506160aaENSP00000423355.1
 
Protein coding
Q6NVB9 -GENCODE basicTSL:1
ENST00000446625.6LIMCH1-204789126aaENSP00000411020.2
 
Protein coding
D6R8Y0 -TSL:5CDS 3' incomplete
ENST00000511424.5LIMCH1-21255126aaENSP00000426353.1
 
Protein coding
D6RGH8 -TSL:3CDS 3' incomplete
ENST00000515785.1LIMCH1-2211129No protein-
 
Protein coding CDS not defined
--TSL:1
ENST00000514190.5LIMCH1-220540No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000515847.1LIMCH1-222490No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000512228.5LIMCH1-214473No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000505705.1LIMCH1-206437No protein-
 
Protein coding CDS not defined
--TSL:3
Statistics

Exons: 7, Coding exons: 3, Transcript length: 1,570 bps, Translation length: 153 residues

Transcript Support Level (TSL)

TSL:1

Version

ENST00000509638.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.