Transcript: ENST00000456448.3 OR7E24-201

Description

olfactory receptor family 7 subfamily E member 24 [Source:HGNC Symbol;Acc:HGNC:8396]

Gene Synonyms

HSHT2, OR19-8, OR7E24P, OR7E24Q

Location

Chromosome 19: 9,250,930-9,252,625 forward strand.

About this transcript

This transcript has 1 exon, is annotated with 25 domains and features, is associated with 1095 variant alleles and maps to 420 oligo probes.

Gene

This transcript is a product of gene ENSG00000237521.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000456448.3	OR7E24-201	1696	339aa	ENSP00000387523.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45955	Q6IFN5	NM_001079935.2	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENST00000641946.1	OR7E24-202	1715	335aa	ENSP00000494223.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS92506	A0A2R8Y4Q1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 1,696 bps, Translation length: 339 residues

MANE

This MANE Select transcript contains ENSP00000387523 and matches to NM_001079935.2 and NP_001073404.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6IFN5

CCDS

This transcript is a member of the Human CCDS set: CCDS45955

Transcript Support Level (TSL)

TSL:NA

Version

ENST00000456448.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000456448.3 OR7E24-201

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Transcript: ENST00000456448.3 OR7E24-201

Summary

About Us

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