Transcript: ENST00000449560.5 HLA-DQA2-208

Description

major histocompatibility complex, class II, DQ alpha 2 [Source:HGNC Symbol;Acc:HGNC:4943]

Gene Synonyms

HLA-DXA

Location

About this transcript

This transcript has 4 exons, is annotated with 16 domains and features and maps to 1269 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000449560.5	HLA-DQA2-208	1648	255aa	ENSP00000401098.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P01906 Q76NI6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENST00000546801.2	HLA-DQA2-209	1152	255aa	ENSP00000447668.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P01906 Q76NI6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,648 bps, Translation length: 255 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P01906

Transcript Support Level (TSL)

TSL:NA

Version

ENST00000449560.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.