Transcript: ENST00000442190.6 TCF19-222

Description

transcription factor 19 [Source:HGNC Symbol;Acc:HGNC:11629]

Gene Synonyms

SC1

Location

Scaffold HSCHR6_MHC_MCF_CTG1: 2,502,701-2,508,330 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 19 domains and features and maps to 1616 oligo probes.

Gene

This transcript is a product of gene ENSG00000224472.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000442190.6	TCF19-222	3281	345aa	ENSP00000414980.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D2IYK5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000449558.2	TCF19-223	2993	345aa	ENSP00000414466.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D2IYK5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000498207.1	TCF19-224	880	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 3,281 bps, Translation length: 345 residues

Transcript Support Level (TSL)

TSL:1

Version

ENST00000442190.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000442190.6 TCF19-222

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Transcript: ENST00000442190.6 TCF19-222

Summary

About Us

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