Transcript: ENST00000435906.5 ZFP57-212

Description

ZFP57 zinc finger protein [Source:HGNC Symbol;Acc:HGNC:18791]

Gene Synonyms

BA145L22, BA145L22.2, C6ORF40, ZNF698

Location

Scaffold HSCHR6_MHC_COX_CTG1: 1,158,956-1,167,618 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 41 domains and features and maps to 1225 oligo probes.

Gene

This transcript is a product of gene ENSG00000226858.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000549167.1	ZFP57-213	1870	536aa	ENSP00000449230.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9NU63-3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000435906.5	ZFP57-212	1980	516aa	ENSP00000412932.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9NU63-2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000549501.2	ZFP57-214	1359	452aa	ENSP00000447698.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9NU63-1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,980 bps, Translation length: 516 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NU63

Transcript Support Level (TSL)

TSL:5

Version

ENST00000435906.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000435906.5 ZFP57-212

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Transcript: ENST00000435906.5 ZFP57-212

Summary

About Us

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