Human (GRCh38.p14)
Description

collagen type XII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2188]

Gene Synonyms

COL12A1L

Location
About this transcript

This transcript has 22 exons, is annotated with 28 domains and features, is associated with 14403 variant alleles and maps to 584 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000322507.13COL12A1-201117253063aaENSP00000325146.8
 
Protein coding
CCDS43482Q99715-1 NM_004370.6MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P4TSL:1
ENST00000483888.6COL12A1-20796373062aaENSP00000421216.1
 
Protein coding
D6RGG3 -GENCODE basicAPPRIS ALT1TSL:5
ENST00000416123.6COL12A1-20389642987aaENSP00000412864.2
 
Protein coding
Q99715-4 -GENCODE basicTSL:5
ENST00000345356.10COL12A1-20258861899aaENSP00000305147.9
 
Protein coding
CCDS43481Q99715-2 -GENCODE basicTSL:1
ENST00000425443.6COL12A1-2053135756aaENSP00000399812.2
 
Protein coding
H0Y5N9 -TSL:5CDS 5' incomplete
ENST00000419671.1COL12A1-2041914638aaENSP00000393217.1
 
Protein coding
H0Y4P7 -TSL:5CDS 5' and 3' incomplete
ENST00000493109.2COL12A1-209794207aaENSP00000423423.1
 
Protein coding
H0Y991 -TSL:5CDS 5' incomplete
ENST00000511023.1COL12A1-210571No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000680102.1COL12A1-2115813No protein-
 
Retained intron
---
ENST00000681086.1COL12A1-2133156No protein-
 
Retained intron
---
ENST00000680981.1COL12A1-2122782No protein-
 
Retained intron
---
ENST00000486533.1COL12A1-2081554No protein-
 
Retained intron
--TSL:1
ENST00000474564.1COL12A1-206499No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 22, Coding exons: 22, Transcript length: 3,135 bps, Translation length: 756 residues

Transcript Support Level (TSL)

TSL:5

Incomplete CDS

CDS 5' incomplete

Version

ENST00000425443.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.