Transcript: ENST00000419982.3 CT47A12-201

Description

cancer/testis antigen family 47 member A12 [Source:HGNC Symbol;Acc:HGNC:33292]

Gene Synonyms

CT47.12

Location

About this transcript

This transcript has 2 exons, is annotated with 17 domains and features, is associated with 5 variant alleles and maps to 1399 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000419982.3	CT47A12-201	1165	288aa	ENSP00000391318.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56607	Q5JQC4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 1,165 bps, Translation length: 288 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5JQC4

CCDS

This transcript is a member of the Human CCDS set: CCDS56607

Transcript Support Level (TSL)

TSL:1

Version

ENST00000419982.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.