Transcript: ENST00000412232.3 ADGRA2-202

Description

adhesion G protein-coupled receptor A2 [Source:HGNC Symbol;Acc:HGNC:17849]

Gene Synonyms

DKFZP434C211, DKFZP434J0911, FLJ14390, GPR124, KIAA1531, TEM5

Location

Chromosome 8: 37,796,883-37,844,896 forward strand.

About this transcript

This transcript has 19 exons, is annotated with 54 domains and features, is associated with 23710 variant alleles and maps to 765 oligo probes.

Gene

This transcript is a product of gene ENSG00000020181.18 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000412232.3	ADGRA2-202	6944	1338aa	ENSP00000406367.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6097	Q96PE1-1	NM_032777.10	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000315215.11	ADGRA2-201	6270	1121aa	ENSP00000323508.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96PE1-2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000428068.5	ADGRA2-203	571	190aa	ENSP00000400860.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C1L1	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 6,944 bps, Translation length: 1,338 residues

MANE

This MANE Select transcript contains ENSP00000406367 and matches to NM_032777.10 and NP_116166.9

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96PE1

CCDS

This transcript is a member of the Human CCDS set: CCDS6097

Transcript Support Level (TSL)

TSL:1

Version

ENST00000412232.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000412232.3 ADGRA2-202

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Transcript: ENST00000412232.3 ADGRA2-202

Summary

About Us

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