Transcript: ENST00000400401.7 TCF19-217

Description

transcription factor 19 [Source:HGNC Symbol;Acc:HGNC:11629]

Gene Synonyms

SC1

Location

Scaffold HSCHR6_MHC_QBL_CTG1: 2,416,574-2,422,248 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 19 domains and features and maps to 1603 oligo probes.

Gene

This transcript is a product of gene ENSG00000206455.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000400401.7	TCF19-217	3291	345aa	ENSP00000383252.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D2IYK5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000383526.4	TCF19-216	3040	345aa	ENSP00000373018.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D2IYK5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000496380.1	TCF19-218	880	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 3,291 bps, Translation length: 345 residues

Transcript Support Level (TSL)

TSL:1

Version

ENST00000400401.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000400401.7 TCF19-217

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENST00000400401.7 TCF19-217

Summary

About Us

Get help

Our sister sites

Follow us