Human (GRCh38.p14)
Description

lysine demethylase 5A [Source:HGNC Symbol;Acc:HGNC:9886]

Gene Synonyms

JARID1A, RBBP2

Location
About this transcript

This transcript has 28 exons, is annotated with 104 domains and features, is associated with 53920 variant alleles and maps to 1248 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000399788.7KDM5A-201107011690aaENSP00000382688.2
 
Protein coding
CCDS41736P29375-1 NM_001042603.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000544760.1KDM5A-2102338715aaENSP00000440622.1
 
Protein coding
E7EV89 -TSL:2CDS 3' incomplete
ENST00000543507.1KDM5A-209575131aaENSP00000444251.1
 
Protein coding
F5GZR8 -TSL:4CDS 3' incomplete
ENST00000536014.5KDM5A-204558122aaENSP00000438203.1
 
Protein coding
F5H322 -TSL:4CDS 3' incomplete
ENST00000535014.5KDM5A-202551126aaENSP00000443854.1
 
Protein coding
F5GZ99 -TSL:4CDS 3' incomplete
ENST00000540838.1KDM5A-207456No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000544777.1KDM5A-211670No protein-
 
Retained intron
--TSL:2
ENST00000540168.1KDM5A-206523No protein-
 
Retained intron
--TSL:5
ENST00000540156.1KDM5A-205516No protein-
 
Retained intron
--TSL:3
ENST00000535269.1KDM5A-203401No protein-
 
Retained intron
--TSL:2
ENST00000541335.1KDM5A-208378No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 28, Coding exons: 28, Transcript length: 10,701 bps, Translation length: 1,690 residues

MANE

This MANE Select transcript contains ENSP00000382688 and matches to NM_001042603.3 and NP_001036068.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: P29375

CCDS

This transcript is a member of the Human CCDS set: CCDS41736

Transcript Support Level (TSL)

TSL:1

Version

ENST00000399788.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.