Human (GRCh38.p14)
Description

collagen type XXV alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:18603]

About this transcript

This transcript has 38 exons, is annotated with 27 domains and features, is associated with 201014 variant alleles and maps to 794 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000399132.6COL25A1-2037713654aaENSP00000382083.1
 
Protein coding
CCDS43258Q9BXS0-1 NM_198721.4MANE SelectEnsembl CanonicalGENCODE basicTSL:5
ENST00000642955.1COL25A1-2088026696aaENSP00000495847.1
 
Protein coding
A0A2R8Y760 -GENCODE basicAPPRIS P1
ENST00000399126.1COL25A1-2012674642aaENSP00000382077.1
 
Protein coding
CCDS43259Q9BXS0-2 -GENCODE basicTSL:5
ENST00000399127.5COL25A1-2022500645aaENSP00000382078.1
 
Protein coding
CCDS58922A8MWQ5 -GENCODE basicTSL:5
ENST00000505591.1COL25A1-20642870aaENSP00000422266.1
 
Protein coding
D6R8Y2 -TSL:3CDS 3' incomplete
ENST00000512961.5COL25A1-20731629aaENSP00000426841.1
 
Protein coding
H0YAE1 -TSL:5CDS 5' incomplete
ENST00000494183.5COL25A1-2044630496aaENSP00000437131.1
 
Nonsense mediated decay
E9PNV9 -TSL:5
ENST00000505377.1COL25A1-205448No protein-
 
Retained intron
--TSL:5
Statistics

Exons: 38, Coding exons: 37, Transcript length: 7,713 bps, Translation length: 654 residues

MANE

This MANE Select transcript contains ENSP00000382083 and matches to NM_198721.4 and NP_942014.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BXS0

CCDS

This transcript is a member of the Human CCDS set: CCDS43258

Transcript Support Level (TSL)

TSL:5

Version

ENST00000399132.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.