Human (GRCh38.p14)
Description

charged multivesicular body protein 1A [Source:HGNC Symbol;Acc:HGNC:8740]

Gene Synonyms

CHMP1, KIAA0047, PCOLN3, PRSM1, VPS46A

Location
About this transcript

This transcript has 7 exons, is annotated with 12 domains and features, is associated with 8795 variant alleles and maps to 404 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000397901.8CHMP1A-2012342196aaENSP00000380998.3
 
Protein coding
CCDS45552Q9HD42-1 NM_002768.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000675909.1CHMP1A-2192550132aaENSP00000502022.1
 
Protein coding
A0A6Q8PFX8 -GENCODE basic
ENST00000676355.1CHMP1A-2252444199aaENSP00000502147.1
 
Protein coding
A0A6Q8PG85 -GENCODE basic
ENST00000674799.1CHMP1A-2112412132aaENSP00000502267.1
 
Protein coding
A0A6Q8PFX8 -GENCODE basic
ENST00000535997.7CHMP1A-2022330253aaENSP00000442120.3
 
Protein coding
F5H875 -GENCODE basicTSL:2
ENST00000675536.1CHMP1A-2162300265aaENSP00000501759.1
 
Protein coding
A0A6Q8PFF8 -GENCODE basic
ENST00000675778.1CHMP1A-2181845147aaENSP00000502825.1
 
Protein coding
A0A6Q8PHU0 -GENCODE basic
ENST00000550102.5CHMP1A-208803187aaENSP00000449243.1
 
Protein coding
F8VVT7 -GENCODE basicTSL:5
ENST00000675016.1CHMP1A-2124008113aaENSP00000502282.1
 
Nonsense mediated decay
A0A6Q8PGM8 --
ENST00000676402.1CHMP1A-2263489383aaENSP00000501794.1
 
Nonsense mediated decay
A0A6Q8PFF9 --
ENST00000549328.2CHMP1A-2072455181aaENSP00000447899.1
 
Nonsense mediated decay
F8VUA2 -TSL:3
ENST00000675161.1CHMP1A-2142429154aaENSP00000501615.1
 
Nonsense mediated decay
A0A6Q8PF35 --
ENST00000675309.1CHMP1A-215232149aaENSP00000502291.1
 
Nonsense mediated decay
A0A6Q8PGI9 --
ENST00000676118.1CHMP1A-222192154aaENSP00000501619.1
 
Nonsense mediated decay
A0A6Q8PF26 --
ENST00000675942.1CHMP1A-2201334204aaENSP00000502409.1
 
Nonsense mediated decay
A0A6Q8PGV2 --
ENST00000675952.1CHMP1A-2212474No protein-
 
Protein coding CDS not defined
---
ENST00000676275.1CHMP1A-2231183No protein-
 
Protein coding CDS not defined
---
ENST00000547614.5CHMP1A-203653No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000675760.1CHMP1A-217494No protein-
 
Protein coding CDS not defined
---
ENST00000676342.1CHMP1A-2243659No protein-
 
Retained intron
---
ENST00000547687.2CHMP1A-2042970No protein-
 
Retained intron
--TSL:1
ENST00000551981.6CHMP1A-2102797No protein-
 
Retained intron
--TSL:2
ENST00000675076.1CHMP1A-2131532No protein-
 
Retained intron
---
ENST00000549139.5CHMP1A-206812No protein-
 
Retained intron
--TSL:2
ENST00000548650.1CHMP1A-205566No protein-
 
Retained intron
--TSL:3
ENST00000550872.1CHMP1A-209533No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 7, Coding exons: 7, Transcript length: 2,342 bps, Translation length: 196 residues

MANE

This MANE Select transcript contains ENSP00000380998 and matches to NM_002768.5 and NP_002759.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9HD42

CCDS

This transcript is a member of the Human CCDS set: CCDS45552

Transcript Support Level (TSL)

TSL:1

Version

ENST00000397901.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.