Human (GRCh38.p14)
Description

cochlin [Source:HGNC Symbol;Acc:HGNC:2180]

Gene Synonyms

COCH-5B2, DFNA31, DFNA9

Location
About this transcript

This transcript has 12 exons, is annotated with 26 domains and features, is associated with 7717 variant alleles and maps to 475 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000396618.9COCH-2022536550aaENSP00000379862.3
 
Protein coding
CCDS9640O43405-1 NM_004086.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000644874.2COCH-2142860550aaENSP00000496360.1
 
Protein coding
CCDS9640O43405-1 -GENCODE basicAPPRIS P1
ENST00000460581.6COCH-2032688438aaENSP00000451713.1
 
Protein coding
G3V4C4 -GENCODE basicTSL:2
ENST00000216361.9COCH-2012582615aaENSP00000216361.5
 
Protein coding
CCDS86382A0A2U3TZE7 -GENCODE basicTSL:1
ENST00000468826.2COCH-2042129434aaENSP00000452284.1
 
Protein coding
H0YJW4 -TSL:2CDS 5' incomplete
ENST00000475087.5COCH-2051997494aaENSP00000451528.1
 
Protein coding
O43405-2 -GENCODE basicTSL:1
ENST00000555117.2COCH-2081930513aaENSP00000493569.1
 
Protein coding
A0A2R8Y3T0 -GENCODE basicTSL:2
ENST00000643575.1COCH-2121819550aaENSP00000494838.1
 
Protein coding
CCDS9640O43405-1 -GENCODE basicAPPRIS P1
ENST00000555881.5COCH-209782202aaENSP00000452569.1
 
Protein coding
G3V5X3 -TSL:2CDS 3' incomplete
ENST00000556908.5COCH-210775193aaENSP00000452541.1
 
Protein coding
G3V5V4 -TSL:3CDS 3' incomplete
ENST00000557065.1COCH-21165455aaENSP00000451629.1
 
Nonsense mediated decay
H0YJJ0 -TSL:5CDS 5' incomplete
ENST00000553772.5COCH-20655480aaENSP00000452343.1
 
Nonsense mediated decay
G3V5G6 -TSL:4
ENST00000643697.1COCH-2132051No protein-
 
Protein coding CDS not defined
---
ENST00000553833.5COCH-207635No protein-
 
Retained intron
--TSL:5
Statistics

Exons: 12, Coding exons: 11, Transcript length: 2,536 bps, Translation length: 550 residues

MANE

This MANE Select transcript contains ENSP00000379862 and matches to NM_004086.3 and NP_004077.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43405

CCDS

This transcript is a member of the Human CCDS set: CCDS9640

Transcript Support Level (TSL)

TSL:1

Version

ENST00000396618.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.