Human (GRCh38.p14)
Description

sphingosine kinase 1 [Source:HGNC Symbol;Acc:HGNC:11240]

Gene Synonyms

SPHK

Location
About this transcript

This transcript has 5 exons, is annotated with 31 domains and features, is associated with 1776 variant alleles and maps to 272 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000592299.6SPHK1-2101816384aaENSP00000465726.2
 
Protein coding
CCDS45785Q9NYA1-1 NM_001142601.2MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P2TSL:1
ENST00000545180.5SPHK1-2032238384aaENSP00000440970.1
 
Protein coding
CCDS45785Q9NYA1-1 -GENCODE basicAPPRIS P2TSL:2
ENST00000323374.8SPHK1-2012138470aaENSP00000313681.3
 
Protein coding
CCDS11744Q9NYA1-2 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000590959.5SPHK1-2071851398aaENSP00000468547.1
 
Protein coding
CCDS59297Q9NYA1-3 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000392496.3SPHK1-2021779384aaENSP00000376285.2
 
Protein coding
CCDS45785Q9NYA1-1 -GENCODE basicAPPRIS P2TSL:1
ENST00000588682.5SPHK1-205858152aaENSP00000466422.1
 
Protein coding
K7EMA4 -TSL:3CDS 3' incomplete
ENST00000590379.5SPHK1-206588111aaENSP00000465002.1
 
Protein coding
K7EJ32 -TSL:3CDS 3' incomplete
ENST00000591651.5SPHK1-2085415aaENSP00000468474.1
 
Protein coding
--TSL:4CDS 3' incomplete
ENST00000591762.1SPHK1-2092502No protein-
 
Retained intron
--TSL:2
ENST00000587167.1SPHK1-204456No protein-
 
Retained intron
--TSL:4
Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,779 bps, Translation length: 384 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NYA1

CCDS

This transcript is a member of the Human CCDS set: CCDS45785

Transcript Support Level (TSL)

TSL:1

Version

ENST00000392496.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.