Transcript: ENST00000390666.4 TSSK1B-201

Description

testis specific serine kinase 1B [Source:HGNC Symbol;Acc:HGNC:14968]

Gene Synonyms

FKSG81, SPOGA4, STK22D, TSSK1

Location

Chromosome 5: 113,432,553-113,434,989 reverse strand.

About this transcript

This transcript has 1 exon, is annotated with 14 domains and features, is associated with 1603 variant alleles and maps to 260 oligo probes.

Gene

This transcript is a product of gene ENSG00000212122.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000390666.4	TSSK1B-201	2437	367aa	ENSP00000375081.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4112	A0ZT98 Q9BXA7	NM_032028.4	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 2,437 bps, Translation length: 367 residues

MANE

This MANE Select transcript contains ENSP00000375081 and matches to NM_032028.4 and NP_114417.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BXA7

CCDS

This transcript is a member of the Human CCDS set: CCDS4112

Transcript Support Level (TSL)

TSL:NA

Version

ENST00000390666.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000390666.4 TSSK1B-201

Summary

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Transcript: ENST00000390666.4 TSSK1B-201

Summary

About Us

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