Human (GRCh38.p14)
Description

lysine demethylase 4A [Source:HGNC Symbol;Acc:HGNC:22978]

Gene Synonyms

JHDM3A, JMJD2, JMJD2A, KIAA0677, TDRD14A

Location
About this transcript

This transcript has 22 exons, is annotated with 273 domains and features, is associated with 23839 variant alleles and maps to 771 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000372396.4KDM4A-20144861064aaENSP00000361473.3
 
Protein coding
CCDS491O75164-1 NM_014663.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000463151.5KDM4A-2021023281aaENSP00000493741.1
 
Protein coding
A0A2R8YDF7 -TSL:5CDS 3' incomplete
ENST00000485249.1KDM4A-2058528aaENSP00000496362.1
 
Nonsense mediated decay
A0A2R8Y7L1 -TSL:3CDS 5' incomplete
ENST00000481296.1KDM4A-204560No protein-
 
Retained intron
--TSL:2
ENST00000472265.1KDM4A-203380No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 22, Coding exons: 21, Transcript length: 4,486 bps, Translation length: 1,064 residues

MANE

This MANE Select transcript contains ENSP00000361473 and matches to NM_014663.3 and NP_055478.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75164

CCDS

This transcript is a member of the Human CCDS set: CCDS491

Transcript Support Level (TSL)

TSL:1

Version

ENST00000372396.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.