Human (GRCh38.p14)
Description

thrombospondin 3 [Source:HGNC Symbol;Acc:HGNC:11787]

About this transcript

This transcript has 23 exons, is annotated with 58 domains and features, is associated with 5778 variant alleles and maps to 705 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000368378.7THBS3-2013145956aaENSP00000357362.3
 
Protein coding
CCDS1099P49746-1 NM_007112.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P3TSL:1
ENST00000541576.5THBS3-2103200947aaENSP00000444792.2
 
Protein coding
CCDS72937F5H4Z8 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000541990.5THBS3-2112928485aaENSP00000437353.1
 
Protein coding
Q2HIZ1 -GENCODE basicTSL:1
ENST00000457183.6THBS3-2032727836aaENSP00000392207.2
 
Protein coding
CCDS58034P49746-2 -GENCODE basicTSL:2
ENST00000428962.2THBS3-2021833400aaENSP00000404040.2
 
Nonsense mediated decay
B4DQH6 -TSL:2
ENST00000486260.5THBS3-2071763No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000460050.1THBS3-204879No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000465596.1THBS3-205489No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000496332.5THBS3-208839No protein-
 
Retained intron
--TSL:3
ENST00000469769.1THBS3-206777No protein-
 
Retained intron
--TSL:2
ENST00000498500.1THBS3-209768No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 23, Coding exons: 23, Transcript length: 3,145 bps, Translation length: 956 residues

MANE

This MANE Select transcript contains ENSP00000357362 and matches to NM_007112.5 and NP_009043.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: P49746

CCDS

This transcript is a member of the Human CCDS set: CCDS1099

Transcript Support Level (TSL)

TSL:1

Version

ENST00000368378.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.