Human (GRCh38.p14)
Description

COP1 E3 ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:17440]

Gene Synonyms

CFAP78, FAP78, FLJ10416, RFWD2, RNF200

About this transcript

This transcript has 20 exons, is annotated with 40 domains and features, is associated with 118798 variant alleles and maps to 589 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000367669.8COP1-2042826731aaENSP00000356641.3
 
Protein coding
CCDS30944Q8NHY2-1 NM_022457.7MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000308769.12COP1-2012124707aaENSP00000310943.8
 
Protein coding
CCDS44279Q8NHY2-2 -GENCODE basicTSL:1
ENST00000367666.5COP1-2022022566aaENSP00000356638.1
 
Protein coding
H0Y339 -TSL:2CDS 5' incomplete
ENST00000459744.5COP1-205741247aaENSP00000437212.1
 
Protein coding
H0YF49 -TSL:3CDS 5' and 3' incomplete
ENST00000498306.5COP1-210617189aaENSP00000433810.1
 
Protein coding
E9PJB5 -TSL:5CDS 3' incomplete
ENST00000649803.1COP1-211233652aaENSP00000497397.1
 
Nonsense mediated decay
A0A3B3ISQ9 -CDS 5' incomplete
ENST00000367667.5COP1-2032034113aaENSP00000356639.1
 
Nonsense mediated decay
H0Y340 -TSL:1CDS 5' incomplete
ENST00000474194.1COP1-207975157aaENSP00000433517.1
 
Nonsense mediated decay
Q8NHY2-5 -TSL:3
ENST00000491600.5COP1-20977368aaENSP00000437275.1
 
Nonsense mediated decay
E9PMW8 -TSL:5
ENST00000461830.6COP1-2062131No protein-
 
Retained intron
--TSL:5
ENST00000482305.1COP1-208450No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 20, Coding exons: 20, Transcript length: 2,826 bps, Translation length: 731 residues

MANE

This MANE Select transcript contains ENSP00000356641 and matches to NM_022457.7 and NP_071902.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NHY2

CCDS

This transcript is a member of the Human CCDS set: CCDS30944

Transcript Support Level (TSL)

TSL:1

Version

ENST00000367669.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.