Human (GRCh38.p14)
Description

SMG7 nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]

Gene Synonyms

C1ORF16, EST1C, KIAA0250, SGA56M, SMG-7

About this transcript

This transcript has 24 exons, is annotated with 26 domains and features, is associated with 33683 variant alleles and maps to 916 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000688051.1SMG7-21659461187aaENSP00000510175.1
 
Protein coding
CCDS91123A0A8I5KYV3 NM_001375584.1MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P4
ENST00000685780.1SMG7-21562041216aaENSP00000508915.1
 
Protein coding
CCDS91124A0A8I5KSL3 -GENCODE basicAPPRIS ALT1
ENST00000367537.7SMG7-20259701170aaENSP00000356507.3
 
Protein coding
CCDS81410E9PD50 -GENCODE basicTSL:5
ENST00000347615.6SMG7-20157881137aaENSP00000340766.2
 
Protein coding
CCDS1355Q92540-1 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000515829.6SMG7-21456291091aaENSP00000421358.2
 
Protein coding
CCDS53444Q92540-2 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000507469.5SMG7-21246421178aaENSP00000425133.1
 
Protein coding
CCDS41445Q92540-4 -GENCODE basicTSL:1
ENST00000508461.5SMG7-21339851145aaENSP00000426915.1
 
Protein coding
CCDS53445Q92540-5 -GENCODE basicTSL:2
ENST00000419169.5SMG7-2042483756aaENSP00000388390.1
 
Protein coding
B1ALB4 -TSL:2CDS 3' incomplete
ENST00000502375.1SMG7-21056656aaENSP00000422056.1
 
Protein coding
D6R9J3 -TSL:5CDS 3' incomplete
ENST00000440812.7SMG7-2051190184aaENSP00000410254.3
 
Nonsense mediated decay
E9PEK3 -TSL:5
ENST00000444547.6SMG7-20658073aaENSP00000400220.2
 
Nonsense mediated decay
E9PBK2 -TSL:4
ENST00000507406.1SMG7-211582No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000495321.1SMG7-209556No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000493045.1SMG7-207673No protein-
 
Retained intron
--TSL:3
ENST00000493609.1SMG7-208624No protein-
 
Retained intron
--TSL:3
ENST00000367538.1SMG7-203328No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 24, Coding exons: 23, Transcript length: 5,970 bps, Translation length: 1,170 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS81410

Transcript Support Level (TSL)

TSL:5

Version

ENST00000367537.7

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.