Human (GRCh38.p14)
Description

endosome associated trafficking regulator 1 [Source:HGNC Symbol;Acc:HGNC:10667]

Gene Synonyms

NY-CO-3, SDCCAG3

About this transcript

This transcript has 10 exons, is annotated with 10 domains and features, is associated with 6075 variant alleles and maps to 520 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000357365.8ENTR1-2022391435aaENSP00000349929.3
 
Protein coding
CCDS43904Q96C92-1 NM_001039707.2MANE SelectEnsembl CanonicalGENCODE basicAPPRIS ALT1TSL:5
ENST00000298537.11ENTR1-2012314412aaENSP00000298537.7
 
Protein coding
CCDS6999Q96C92-2 -GENCODE basicAPPRIS P3TSL:1
ENST00000371725.7ENTR1-2042129362aaENSP00000360790.3
 
Protein coding
CCDS43903Q96C92-4 -GENCODE basicAPPRIS ALT1TSL:5
ENST00000371723.4ENTR1-203865223aaENSP00000360788.4
 
Protein coding
A0A0A0MRP9 -TSL:2CDS 3' incomplete
ENST00000417512.1ENTR1-205626167aaENSP00000409255.1
 
Protein coding
H7C331 -TSL:2CDS 5' incomplete
ENST00000446833.1ENTR1-206459108aaENSP00000409357.1
 
Protein coding
B5MDD7 -TSL:3CDS 3' incomplete
ENST00000461693.5ENTR1-207869No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000468963.1ENTR1-209686No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000486441.1ENTR1-211570No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000466579.1ENTR1-208496No protein-
 
Protein coding CDS not defined
--TSL:1
ENST00000481114.1ENTR1-210340No protein-
 
Protein coding CDS not defined
--TSL:2
Statistics

Exons: 10, Coding exons: 10, Transcript length: 2,391 bps, Translation length: 435 residues

MANE

This MANE Select transcript contains ENSP00000349929 and matches to NM_001039707.2 and NP_001034796.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96C92

CCDS

This transcript is a member of the Human CCDS set: CCDS43904

Transcript Support Level (TSL)

TSL:5

Version

ENST00000357365.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.