Transcript: ENST00000340857.4 H1-0-201

Description

H1.0 linker histone [Source:HGNC Symbol;Acc:HGNC:4714]

Gene Synonyms

H1.0, H1F0, H1FV

Location

Chromosome 22: 37,805,229-37,807,432 forward strand.

About this transcript

This transcript has 1 exon, is annotated with 34 domains and features, is associated with 1361 variant alleles and maps to 492 oligo probes.

Gene

This transcript is a product of gene ENSG00000189060.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000340857.4	H1-0-201	2204	194aa	ENSP00000344504.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13956	P07305-1	NM_005318.4	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 2,204 bps, Translation length: 194 residues

MANE

This MANE Select transcript contains ENSP00000344504 and matches to NM_005318.4 and NP_005309.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: P07305

CCDS

This transcript is a member of the Human CCDS set: CCDS13956

Transcript Support Level (TSL)

TSL:NA

Version

ENST00000340857.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000340857.4 H1-0-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENST00000340857.4 H1-0-201

Summary

About Us

Get help

Our sister sites

Follow us