Human (GRCh38.p14)
Description

intermediate filament family orphan 1 [Source:HGNC Symbol;Acc:HGNC:24970]

Gene Synonyms

HOM-TES-103, IFFO

Location
About this transcript

This transcript has 10 exons, is annotated with 25 domains and features, is associated with 7942 variant alleles and maps to 521 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000619571.5IFFO1-2102673571aaENSP00000482285.1
 
Protein coding
CCDS73425A0A087WZ16 NM_001193457.2MANE SelectEnsembl CanonicalGENCODE basicAPPRIS ALT1TSL:2
ENST00000465801.5IFFO1-2052850255aaENSP00000436261.1
 
Protein coding
E9PPX7 -GENCODE basicTSL:5
ENST00000336604.8IFFO1-2012686562aaENSP00000337593.4
 
Protein coding
CCDS8550Q0D2I5-4 -GENCODE basicAPPRIS P4TSL:1
ENST00000356896.8IFFO1-2022680563aaENSP00000349364.4
 
Protein coding
CCDS41741Q0D2I5-5 -GENCODE basicAPPRIS ALT1TSL:5
ENST00000396840.6IFFO1-2042677559aaENSP00000380052.2
 
Protein coding
CCDS81655Q0D2I5-1 -GENCODE basicAPPRIS ALT1TSL:5
ENST00000487279.6IFFO1-2082786264aaENSP00000432493.2
 
Nonsense mediated decay
Q0D2I5-3 -TSL:1
ENST00000488007.5IFFO1-2093001No protein-
 
Retained intron
--TSL:5
ENST00000471408.5IFFO1-2062843No protein-
 
Retained intron
--TSL:2
ENST00000472558.6IFFO1-2072571No protein-
 
Retained intron
--TSL:2
ENST00000396830.2IFFO1-2031776No protein-
 
Retained intron
--TSL:1
Statistics

Exons: 10, Coding exons: 10, Transcript length: 2,686 bps, Translation length: 562 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q0D2I5

CCDS

This transcript is a member of the Human CCDS set: CCDS8550

Transcript Support Level (TSL)

TSL:1

Version

ENST00000336604.8

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.