Transcript: ENST00000330194.2 CABCOCO1-201

Description

ciliary associated calcium binding coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:28678]

Gene Synonyms

ARIEL, BA63A2.1, C10ORF107, EM:AC022398.2, MGC44593

Location

Chromosome 10: 61,662,961-61,766,766 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 5 domains and features, is associated with 44029 variant alleles and maps to 285 oligo probes.

Gene

This transcript is a product of gene ENSG00000183346.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000648843.3	CABCOCO1-203	1688	296aa	ENSP00000496918.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS91247	A0A7I2UT39	NM_001366906.2	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000330194.2	CABCOCO1-201	1685	208aa	ENSP00000328698.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7262	Q8IVU9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000389639.3	CABCOCO1-202	253	69aa	ENSP00000374290.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y3I3	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,685 bps, Translation length: 208 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8IVU9

CCDS

This transcript is a member of the Human CCDS set: CCDS7262

Transcript Support Level (TSL)

TSL:1

Version

ENST00000330194.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000330194.2 CABCOCO1-201

Summary

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Transcript: ENST00000330194.2 CABCOCO1-201

Summary

About Us

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