Human (GRCh38.p14)
Description

clarin 1 [Source:HGNC Symbol;Acc:HGNC:12605]

Gene Synonyms

RP61, USH3, USH3A

About this transcript

This transcript has 3 exons, is annotated with 8 domains and features, is associated with 20240 variant alleles and maps to 387 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000327047.6CLRN1-2022087232aaENSP00000322280.1
 
Protein coding
CCDS3153P58418-3 NM_174878.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000295911.6CLRN1-2011444120aaENSP00000295911.2
 
Protein coding
CCDS35492P58418-1 -GENCODE basicTSL:1
ENST00000328863.8CLRN1-203738245aaENSP00000329158.4
 
Protein coding
CCDS56285P58418-4 -GENCODE basicTSL:1
ENST00000468836.2CLRN1-204722177aaENSP00000419892.2
 
Protein coding
C9JYI2 -TSL:3CDS 5' incomplete
ENST00000645441.1CLRN1-20846849aaENSP00000496637.1
 
Nonsense mediated decay
A0A2R8Y8A4 -CDS 5' incomplete
ENST00000644099.1CLRN1-20746448aaENSP00000494762.1
 
Nonsense mediated decay
E1ACV0 -CDS 5' incomplete
ENST00000485607.1CLRN1-206704No protein-
 
Protein coding CDS not defined
--TSL:1
ENST00000472224.1CLRN1-205606No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 3, Coding exons: 3, Transcript length: 2,087 bps, Translation length: 232 residues

MANE

This MANE Select transcript contains ENSP00000322280 and matches to NM_174878.3 and NP_777367.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: P58418

CCDS

This transcript is a member of the Human CCDS set: CCDS3153

Transcript Support Level (TSL)

TSL:1

Version

ENST00000327047.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.