Human (GRCh38.p14)
Description

lysyl-tRNA synthetase 1 [Source:HGNC Symbol;Acc:HGNC:6215]

Gene Synonyms

DFNB89, KARS, KARS2

Location
About this transcript

This transcript has 15 exons, is annotated with 24 domains and features, is associated with 11747 variant alleles and maps to 885 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000302445.8KARS1-2011991597aaENSP00000303043.3
 
Protein coding
CCDS10923Q15046-1 NM_005548.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS ALT1TSL:1
ENST00000319410.9KARS1-2022421625aaENSP00000325448.5
 
Protein coding
CCDS45532Q15046-2 -GENCODE basicAPPRIS P4TSL:1
ENST00000570215.1KARS1-212994256aaENSP00000458028.1
 
Protein coding
H3BVA8 -TSL:3CDS 3' incomplete
ENST00000568682.5KARS1-210870102aaENSP00000462057.1
 
Protein coding
J3KRL2 -TSL:3CDS 3' incomplete
ENST00000566772.1KARS1-208644104aaENSP00000455488.1
 
Protein coding
H3BPV7 -TSL:2CDS 5' incomplete
ENST00000568378.5KARS1-20945967aaENSP00000454512.1
 
Protein coding
H3BMR9 -GENCODE basicTSL:5
ENST00000564578.5KARS1-2041942124aaENSP00000455818.1
 
Nonsense mediated decay
H3BQK5 -TSL:5
ENST00000562875.5KARS1-20380176aaENSP00000456185.1
 
Nonsense mediated decay
H3BRC9 -TSL:3
ENST00000566249.5KARS1-20664986aaENSP00000456786.1
 
Nonsense mediated decay
H3BSN6 -TSL:5CDS 5' incomplete
ENST00000566560.5KARS1-2071231No protein-
 
Retained intron
--TSL:1
ENST00000565738.1KARS1-205607No protein-
 
Retained intron
--TSL:2
ENST00000569298.1KARS1-211589No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 15, Coding exons: 14, Transcript length: 2,421 bps, Translation length: 625 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q15046

CCDS

This transcript is a member of the Human CCDS set: CCDS45532

Transcript Support Level (TSL)

TSL:1

Version

ENST00000319410.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.