Human (GRCh38.p14)
Description

spastin [Source:HGNC Symbol;Acc:HGNC:11233]

Gene Synonyms

ADPSP, FSP2, KIAA1083, SPG4

Location
About this transcript

This transcript has 17 exons, is annotated with 48 domains and features, is associated with 50690 variant alleles and maps to 667 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000315285.9SPAST-2015268616aaENSP00000320885.3
 
Protein coding
CCDS1778Q9UBP0-1 NM_014946.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P4TSL:1
ENST00000646571.1SPAST-2175117584aaENSP00000495015.1
 
Protein coding
CCDS1779Q9UBP0-2 -GENCODE basicAPPRIS ALT2
ENST00000644954.1SPAST-2104732498aaENSP00000494312.1
 
Protein coding
Q9UBP0-4 -GENCODE basicAPPRIS ALT2
ENST00000642999.1SPAST-2064701530aaENSP00000496589.1
 
Protein coding
Q9UBP0-3 -GENCODE basicAPPRIS ALT2
ENST00000642751.1SPAST-2054695476aaENSP00000495478.1
 
Protein coding
A0A2R8YFW8 -CDS 5' incomplete
ENST00000647133.1SPAST-2192571450aaENSP00000493742.1
 
Protein coding
A0A2R8Y481 -CDS 5' incomplete
ENST00000644408.1SPAST-2092211530aaENSP00000493748.1
 
Protein coding
A0A2R8YCL5 -CDS 5' incomplete
ENST00000642281.1SPAST-2032128529aaENSP00000496211.1
 
Protein coding
A0A2R8YGN6 -CDS 5' incomplete
ENST00000642455.1SPAST-2042107583aaENSP00000493827.1
 
Protein coding
CCDS86830A0A2R8Y4I8 -GENCODE basicAPPRIS ALT2
ENST00000621856.2SPAST-2022084615aaENSP00000482496.2
 
Protein coding
CCDS92732A0A2U3TZR0 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000645671.1SPAST-2141491368aaENSP00000494601.1
 
Protein coding
A0A2R8Y5N9 -CDS 5' incomplete
ENST00000645730.1SPAST-2151029343aaENSP00000496072.1
 
Protein coding
A0A2R8Y7K2 -CDS 5' and 3' incomplete
ENST00000704289.1SPAST-2202350152aaENSP00000515816.1
 
Nonsense mediated decay
A0A994J6X4 --
ENST00000646082.1SPAST-2161636178aaENSP00000496334.1
 
Nonsense mediated decay
A0A2R8YFC9 -CDS 5' incomplete
ENST00000643334.1SPAST-208138672aaENSP00000494832.1
 
Nonsense mediated decay
A0A2R8Y5I6 -CDS 5' incomplete
ENST00000645400.1SPAST-21275388aaENSP00000496306.1
 
Nonsense mediated decay
A0A2R8Y7W6 -CDS 5' incomplete
ENST00000643327.1SPAST-207617166aaENSP00000494170.1
 
Nonsense mediated decay
A0A2R8YEA0 -CDS 5' incomplete
ENST00000647007.1SPAST-2181767No protein-
 
Protein coding CDS not defined
---
ENST00000645159.1SPAST-2112891No protein-
 
Retained intron
---
ENST00000645550.1SPAST-2132583No protein-
 
Retained intron
---
Statistics

Exons: 17, Coding exons: 17, Transcript length: 5,268 bps, Translation length: 616 residues

MANE

This MANE Select transcript contains ENSP00000320885 and matches to NM_014946.4 and NP_055761.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UBP0

CCDS

This transcript is a member of the Human CCDS set: CCDS1778

Transcript Support Level (TSL)

TSL:1

Version

ENST00000315285.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.