Human (GRCh38.p14)
Description

LIM domain binding 2 [Source:HGNC Symbol;Acc:HGNC:6533]

Gene Synonyms

CLIM1, LDB1

Location
About this transcript

This transcript has 8 exons, is annotated with 11 domains and features, is associated with 172378 variant alleles and maps to 389 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000304523.10LDB2-2012384373aaENSP00000306772.5
 
Protein coding
CCDS3420O43679-1 NM_001290.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P4TSL:1
ENST00000502640.5LDB2-2032626313aaENSP00000423963.1
 
Protein coding
CCDS77902E9PFI4 -GENCODE basicTSL:1
ENST00000441778.6LDB2-2022476331aaENSP00000392089.2
 
Protein coding
CCDS47031O43679-2 -GENCODE basicTSL:1
ENST00000515064.5LDB2-2162295371aaENSP00000422552.1
 
Protein coding
CCDS77903G5E9Y7 -GENCODE basicAPPRIS ALT1TSL:2
ENST00000507464.5LDB2-2091485294aaENSP00000425754.1
 
Protein coding
H0YA09 -TSL:5CDS 5' incomplete
ENST00000506732.1LDB2-208567164aaENSP00000421767.1
 
Protein coding
D6RAT1 -TSL:4CDS 3' incomplete
ENST00000508918.5LDB2-2111498110aaENSP00000424770.1
 
Nonsense mediated decay
E7EX95 -TSL:5
ENST00000512345.5LDB2-214923106aaENSP00000424676.1
 
Nonsense mediated decay
E9PGU0 -TSL:5
ENST00000503829.5LDB2-205583No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000504886.5LDB2-207574No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000503153.5LDB2-204573No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000510825.5LDB2-213562No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000513457.5LDB2-215530No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000504189.1LDB2-206499No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000509803.1LDB2-2122718No protein-
 
Retained intron
--TSL:2
ENST00000508804.5LDB2-210515No protein-
 
Retained intron
--TSL:5
Statistics

Exons: 8, Coding exons: 8, Transcript length: 2,384 bps, Translation length: 373 residues

MANE

This MANE Select transcript contains ENSP00000306772 and matches to NM_001290.5 and NP_001281.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43679

CCDS

This transcript is a member of the Human CCDS set: CCDS3420

Transcript Support Level (TSL)

TSL:1

Version

ENST00000304523.10

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.