Transcript: ENST00000276101.7 AWAT2-201

Description

acyl-CoA wax alcohol acyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:23251]

Gene Synonyms

DGAT2L4, MFAT

Location

Chromosome X: 70,040,542-70,049,938 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 8 domains and features, is associated with 2894 variant alleles and maps to 318 oligo probes.

Gene

This transcript is a product of gene ENSG00000147160.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000276101.7	AWAT2-201	2124	333aa	ENSP00000421172.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35320	Q6E213	NM_001002254.1	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000440401.1	AWAT2-202	986	166aa	ENSP00000427523.1	Nonsense mediated decay		H0YAL0	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000443056.1	AWAT2-203	606	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 2,124 bps, Translation length: 333 residues

MANE

This MANE Select transcript contains ENSP00000421172 and matches to NM_001002254.1 and NP_001002254.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6E213

CCDS

This transcript is a member of the Human CCDS set: CCDS35320

Transcript Support Level (TSL)

TSL:5

Version

ENST00000276101.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000276101.7 AWAT2-201

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Transcript: ENST00000276101.7 AWAT2-201

Summary

About Us

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