Human (GRCh38.p14)
Description

SATB homeobox 2 [Source:HGNC Symbol;Acc:HGNC:21637]

Gene Synonyms

FLJ21474, KIAA1034

About this transcript

This transcript has 12 exons, is annotated with 43 domains and features, is associated with 80689 variant alleles and maps to 529 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000417098.6SATB2-2025568733aaENSP00000401112.1
 
Protein coding
CCDS2327Q9UPW6-1 NM_001172509.2MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:2
ENST00000443023.5SATB2-2056194674aaENSP00000388764.1
 
Protein coding
C9JR56 -GENCODE basicTSL:5
ENST00000260926.9SATB2-2015318733aaENSP00000260926.5
 
Protein coding
CCDS2327Q9UPW6-1 -GENCODE basicAPPRIS P1TSL:1
ENST00000700191.1SATB2-2114749615aaENSP00000514853.1
 
Protein coding
Q9UPW6-2 -GENCODE basic
ENST00000700208.1SATB2-2163515118aaENSP00000514860.1
 
Protein coding
A0A8V8TR16 -GENCODE basic
ENST00000700193.1SATB2-2133175733aaENSP00000514854.1
 
Protein coding
CCDS2327Q9UPW6-1 -GENCODE basicAPPRIS P1
ENST00000457245.5SATB2-2062656733aaENSP00000405420.1
 
Protein coding
CCDS2327Q9UPW6-1 -GENCODE basicAPPRIS P1TSL:2
ENST00000428695.6SATB2-2032313615aaENSP00000388581.1
 
Protein coding
Q9UPW6-2 -GENCODE basicTSL:1
ENST00000700210.1SATB2-2182281487aaENSP00000514861.1
 
Protein coding
A0A8V8TPF3 -CDS 5' incomplete
ENST00000440919.1SATB2-2042166126aaENSP00000415610.1
 
Nonsense mediated decay
F8WCV6 -TSL:1
ENST00000700207.1SATB2-2153770No protein-
 
Protein coding CDS not defined
---
ENST00000700194.1SATB2-2143171No protein-
 
Protein coding CDS not defined
---
ENST00000700209.1SATB2-2172286No protein-
 
Protein coding CDS not defined
---
ENST00000484124.1SATB2-210579No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000463386.1SATB2-207372No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000700192.1SATB2-2123781No protein-
 
Retained intron
---
ENST00000483346.2SATB2-2092647No protein-
 
Retained intron
--TSL:2
ENST00000473517.1SATB2-208592No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 12, Coding exons: 10, Transcript length: 5,318 bps, Translation length: 733 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UPW6

CCDS

This transcript is a member of the Human CCDS set: CCDS2327

Transcript Support Level (TSL)

TSL:1

Version

ENST00000260926.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.