Human (GRCh38.p14)
Description

chondroitin sulfate synthase 1 [Source:HGNC Symbol;Acc:HGNC:17198]

Gene Synonyms

CSS1, KIAA0990

About this transcript

This transcript has 3 exons, is annotated with 15 domains and features, is associated with 36633 variant alleles and maps to 336 oligo probes.

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000254190.4CHSY1-2014662802aaENSP00000254190.3
 
Protein coding
CCDS10390Q86X52 NM_014918.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000543813.2CHSY1-202217353aaENSP00000496160.1
 
Nonsense mediated decay
A0A2R8Y7B7 -TSL:2CDS 5' incomplete
ENST00000561414.1CHSY1-206564No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000560766.1CHSY1-204553No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000559384.1CHSY1-203139No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000561143.1CHSY1-205819No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 3, Coding exons: 3, Transcript length: 4,662 bps, Translation length: 802 residues

MANE

This MANE Select transcript contains ENSP00000254190 and matches to NM_014918.5 and NP_055733.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q86X52

CCDS

This transcript is a member of the Human CCDS set: CCDS10390

Transcript Support Level (TSL)

TSL:1

Version

ENST00000254190.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.