Human (GRCh38.p14)
Description

LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:HGNC Symbol;Acc:HGNC:20470]

Gene Synonyms

YNL147W

Location
About this transcript

This transcript has 4 exons, is annotated with 15 domains and features, is associated with 3778 variant alleles and maps to 268 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000252622.15LSM7-201491103aaENSP00000252622.8
 
Protein coding
CCDS45907Q9UK45 NM_016199.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000587502.2LSM7-20457549aaENSP00000485007.1
 
Protein coding
A0A087X2I5 -GENCODE basicTSL:1
ENST00000585409.2LSM7-20351235aaENSP00000467145.1
 
Protein coding
K7ENY5 -GENCODE basicTSL:2
ENST00000585395.6LSM7-20262160aaENSP00000466556.2
 
Nonsense mediated decay
K7EML7 -TSL:3CDS 5' incomplete
ENST00000589532.5LSM7-205539No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000591515.6LSM7-206710No protein-
 
Retained intron
--TSL:2
ENST00000591745.1LSM7-207543No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 4, Coding exons: 4, Transcript length: 491 bps, Translation length: 103 residues

MANE

This MANE Select transcript contains ENSP00000252622 and matches to NM_016199.3 and NP_057283.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UK45

CCDS

This transcript is a member of the Human CCDS set: CCDS45907

Transcript Support Level (TSL)

TSL:1

Version

ENST00000252622.15

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.