Transcript: ENST00000250838.6 CDY2A-201

Description

chromodomain Y-linked 2A [Source:HGNC Symbol;Acc:HGNC:1810]

Gene Synonyms

CDY2

Location

Chromosome Y: 18,025,787-18,027,746 forward strand.

About this transcript

This transcript has 1 exon, is annotated with 26 domains and features, is associated with 21 variant alleles and maps to 531 oligo probes.

Gene

This transcript is a product of gene ENSG00000182415.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000250838.6	CDY2A-201	1960	541aa	ENSP00000250838.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14789	Q9Y6F7	NM_004825.2	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 1,960 bps, Translation length: 541 residues

MANE

This MANE Select transcript contains ENSP00000250838 and matches to NM_004825.2 and NP_004816.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y6F7

CCDS

This transcript is a member of the Human CCDS set: CCDS14789

Transcript Support Level (TSL)

TSL:NA

Version

ENST00000250838.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000250838.6 CDY2A-201

Summary

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Transcript: ENST00000250838.6 CDY2A-201

Summary

About Us

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