Transcript: ENSSSCT00000057050.3 COL25A1-204

Description

collagen type XXV alpha 1 chain [Source:VGNC Symbol;Acc:VGNC:109651]

Location

About this transcript

This transcript has 42 exons, is annotated with 26 domains and features and is associated with 9973 variant alleles.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000057050.3	COL25A1-204	5726	695aa	ENSSSCP00000032351.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZLN3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000057645.3	COL25A1-203	5600	653aa	ENSSSCP00000036219.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZX69	-
ENSSSCT00000060299.3	COL25A1-201	5154	492aa	ENSSSCP00000032209.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZKW9	-
ENSSSCT00000049409.3	COL25A1-202	1287	403aa	ENSSSCP00000033136.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZNH9	-

Summary

Statistics

Exons: 42, Coding exons: 40, Transcript length: 5,726 bps, Translation length: 695 residues

Version

ENSSSCT00000057050.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Frameshift introns

Frameshift introns occur at intron number(s) 19.