Transcript: ENSSSCT00000052450.3 COL4A4-202

Description

collagen type IV alpha 4 chain [Source:VGNC Symbol;Acc:VGNC:95980]

Location

About this transcript

This transcript has 49 exons, is annotated with 66 domains and features, is associated with 7332 variant alleles and maps to 11 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000052450.3	COL4A4-202	5625	1689aa	ENSSSCP00000049345.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AZF2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000063167.3	COL4A4-203	4427	1289aa	ENSSSCP00000035827.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZWF0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000039391.3	COL4A4-204	4128	1192aa	ENSSSCP00000036534.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZXV9	-
ENSSSCT00000094833.1	COL4A4-201	141	46aa	ENSSSCP00000074775.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4F900	-

Summary

Statistics

Exons: 49, Coding exons: 49, Transcript length: 5,625 bps, Translation length: 1,689 residues

Version

ENSSSCT00000052450.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Frameshift introns

Frameshift introns occur at intron number(s) 1, 19.