Transcript: ENSSSCT00000050550.3 SPN-202

Description

sialophorin [Source:VGNC Symbol;Acc:VGNC:93412]

Location

About this transcript

This transcript has 2 exons, is annotated with 12 domains and features and is associated with 527 variant alleles.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000050550.3	SPN-202	3666	419aa	ENSSSCP00000033857.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZQH4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000082064.1	SPN-201	3595	405aa	ENSSSCP00000067736.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R0K6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 3,666 bps, Translation length: 419 residues

Version

ENSSSCT00000050550.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.