Transcript: ENSSSCT00000049118.2 PRPF40A-202

Description

pre-mRNA processing factor 40 homolog A [Source:VGNC Symbol;Acc:VGNC:98222]

Location

About this transcript

This transcript has 26 exons, is annotated with 68 domains and features, is associated with 773 variant alleles and maps to 22 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000049118.2	PRPF40A-202	8056	994aa	ENSSSCP00000055947.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BHV8 A0A8D1ASR4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000049460.3	PRPF40A-203	8002	976aa	ENSSSCP00000048445.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AX30 A0A8D0RY33	-
ENSSSCT00000064185.3	PRPF40A-204	7960	962aa	ENSSSCP00000031455.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZIV9 A0A8D0RXB2	-
ENSSSCT00000037304.3	PRPF40A-205	7927	951aa	ENSSSCP00000034241.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZRZ0 A0A8D1YTN9	-
ENSSSCT00000017278.4	PRPF40A-201	7380	835aa	ENSSSCP00000016816.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1FZV2 F1RQH2	-

Summary

Statistics

Exons: 26, Coding exons: 26, Transcript length: 8,056 bps, Translation length: 994 residues

Version

ENSSSCT00000049118.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.