Transcript: ENSSSCT00000042391.3 COL15A1-208

Description

collagen type XV alpha 1 chain [Source:VGNC Symbol;Acc:VGNC:86866]

Location

Primary_assembly 1: 240,717,993-240,828,793 forward strand.

About this transcript

This transcript has 42 exons, is annotated with 40 domains and features, is associated with 4419 variant alleles and maps to 12 oligo probes.

Gene

This transcript is a product of gene ENSSSCG00000005380.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000005920.5	COL15A1-204	4829	1359aa	ENSSSCP00000005773.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1SSE8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000095429.1	COL15A1-207	5657	1333aa	ENSSSCP00000079698.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FLB5	-
ENSSSCT00000037246.3	COL15A1-203	5108	1319aa	ENSSSCP00000048772.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AX97	-
ENSSSCT00000042391.3	COL15A1-208	4714	1317aa	ENSSSCP00000042716.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AFT5	-
ENSSSCT00000095865.1	COL15A1-205	4595	1220aa	ENSSSCP00000080514.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FNM4	-
ENSSSCT00000053184.2	COL15A1-202	4538	1201aa	ENSSSCP00000056238.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BIN8	-
ENSSSCT00000092789.1	COL15A1-206	4496	1187aa	ENSSSCP00000076033.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FCK3	-
ENSSSCT00000005921.4	COL15A1-201	1868	298aa	ENSSSCP00000005774.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1SSE7	-

Summary

Statistics

Exons: 42, Coding exons: 39, Transcript length: 4,714 bps, Translation length: 1,317 residues

Version

ENSSSCT00000042391.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSSSCT00000042391.3 COL15A1-208

Summary

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Transcript: ENSSSCT00000042391.3 COL15A1-208

Summary

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