Transcript: ENSSSCT00000042351.3 CLSPN-201

Description

claspin [Source:VGNC Symbol;Acc:VGNC:86783]

Location

About this transcript

This transcript has 26 exons, is annotated with 37 domains and features, is associated with 1496 variant alleles and maps to 23 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000042351.3	CLSPN-201	6324	1325aa	ENSSSCP00000032585.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZLZ9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000004024.5	CLSPN-202	6015	1237aa	ENSSSCP00000003933.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VX73 F1SV65	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 26, Coding exons: 24, Transcript length: 6,324 bps, Translation length: 1,325 residues

Version

ENSSSCT00000042351.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.