phosphodiesterase 1C [Source:VGNC Symbol;Acc:VGNC:91250]
Primary_assembly 18: 40,916,192-41,400,629 forward strand.
This transcript has 20 exons, is annotated with 25 domains and features, is associated with 21003 variant alleles and maps to 12 oligo probes.
This transcript is a product of gene ENSSSCG00000016668.5 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSSSCT00000081921.2 | PDE1C-204 | 4076 | 787aa | ENSSSCP00000069930.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2R0L7 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, |
| ENSSSCT00000039072.3 | PDE1C-205 | 4336 | 704aa | ENSSSCP00000031378.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A286ZIV6 | - |
| ENSSSCT00000054189.3 | PDE1C-202 | 3855 | 635aa | ENSSSCP00000054298.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287BDV0 A0A4X1SUD5 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| ENSSSCT00000078966.2 | PDE1C-203 | 2553 | 710aa | ENSSSCP00000059731.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2QN37 A0A8D1XAB2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000076053.2 | PDE1C-207 | 2369 | 770aa | ENSSSCP00000061441.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2QCY6 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000089635.2 | PDE1C-208 | 2364 | 647aa | ENSSSCP00000064822.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2QS39 A0A8D2BXJ2 | - |
| ENSSSCT00000018148.5 | PDE1C-206 | 2064 | 687aa | ENSSSCP00000017657.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F1SIK2 | - |
| ENSSSCT00000018147.5 | PDE1C-201 | 1857 | 618aa | ENSSSCP00000017656.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8D1TWP9 F1SIK3 | - |