Transcript: ENSSSCT00000029189.4 SLC38A4-203

Description

solute carrier family 38 member 4 [Source:VGNC Symbol;Acc:VGNC:93096]

Location

Primary_assembly 5: 77,411,613-77,458,964 reverse strand.

About this transcript

This transcript has 16 exons, is annotated with 18 domains and features, is associated with 1898 variant alleles and maps to 12 oligo probes.

Gene

This transcript is a product of gene ENSSSCG00000026597.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000029189.4	SLC38A4-203	5349	579aa	ENSSSCP00000023446.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1GBP4 I3LHA1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000044315.2	SLC38A4-202	6218	519aa	ENSSSCP00000035975.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZWZ2	-
ENSSSCT00000078170.1	SLC38A4-201	5193	235aa	ENSSSCP00000060310.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QE44 A0A8D1DRF4	-
ENSSSCT00000057312.3	SLC38A4-204	4117	538aa	ENSSSCP00000038516.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A434 A0A8D1APW4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 5,349 bps, Translation length: 579 residues

Version

ENSSSCT00000029189.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSSSCT00000029189.4 SLC38A4-203

Summary

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Transcript: ENSSSCT00000029189.4 SLC38A4-203

Summary

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