Transcript: ENSSSCT00000028105.4 LSM5-202

Description

LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:HGNC Symbol;Acc:HGNC:17162]

Location

About this transcript

This transcript has 5 exons, is annotated with 8 domains and features, is associated with 533 variant alleles and maps to 7 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000028105.4	LSM5-202	526	91aa	ENSSSCP00000025145.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SQM6 I3LM25	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000087262.2	LSM5-201	217	64aa	ENSSSCP00000068664.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RD92 A0A8D1SNE8	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 526 bps, Translation length: 91 residues

Version

ENSSSCT00000028105.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.