Transcript: ENSSSCT00000025405.3 SYNJ2-202

Description

synaptojanin 2 [Source:VGNC Symbol;Acc:VGNC:93669]

Location

About this transcript

This transcript has 28 exons, is annotated with 27 domains and features, is associated with 4776 variant alleles and maps to 11 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000025405.3	SYNJ2-202	6716	1402aa	ENSSSCP00000020455.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3L8U4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000032465.3	SYNJ2-201	5610	1278aa	ENSSSCP00000027068.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1AUN3 I3LSH5	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 28, Coding exons: 27, Transcript length: 6,716 bps, Translation length: 1,402 residues

Version

ENSSSCT00000025405.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.