Transcript: ENSSSCT00000024347.4 COL6A1-202

Description

collagen type VI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2211]

Location

About this transcript

This transcript has 36 exons, is annotated with 40 domains and features, is associated with 514 variant alleles and maps to 34 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000024347.4	COL6A1-202	3550	1028aa	ENSSSCP00000026963.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3LS72	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000083024.2	COL6A1-203	3460	998aa	ENSSSCP00000060149.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2Q7R0	-
ENSSSCT00000039559.3	COL6A1-201	2089	433aa	ENSSSCP00000051801.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B5M9 A0A8D1INM4	-

Summary

Statistics

Exons: 36, Coding exons: 34, Transcript length: 3,550 bps, Translation length: 1,028 residues

Version

ENSSSCT00000024347.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.