Transcript: ENSSSCT00000018946.5 ATP6V0A1-203

Description

ATPase H+ transporting V0 subunit a1 [Source:VGNC Symbol;Acc:VGNC:85663]

Location

Primary_assembly 12: 20,288,411-20,342,078 reverse strand.

About this transcript

This transcript has 21 exons, is annotated with 12 domains and features, is associated with 1686 variant alleles and maps to 13 oligo probes.

Gene

This transcript is a product of gene ENSSSCG00000017401.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000065605.3	ATP6V0A1-202	2956	845aa	ENSSSCP00000041220.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ABM6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000058628.3	ATP6V0A1-204	4390	832aa	ENSSSCP00000053907.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BC33 A0A4X1U3I6	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000069817.2	ATP6V0A1-205	4315	807aa	ENSSSCP00000065529.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QNA8	-
ENSSSCT00000079907.2	ATP6V0A1-206	4282	796aa	ENSSSCP00000059994.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2Q7E4 A0A8D0UXX6	-
ENSSSCT00000018941.5	ATP6V0A1-208	4181	838aa	ENSSSCP00000018436.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1U3K4 F1S1D6	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000018946.5	ATP6V0A1-203	4144	767aa	ENSSSCP00000018441.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1VUP1 F1S0R1	-
ENSSSCT00000063144.2	ATP6V0A1-207	3951	793aa	ENSSSCP00000053338.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BB51 A0A4X1U3Z2	-
ENSSSCT00000066140.3	ATP6V0A1-201	3690	672aa	ENSSSCP00000037668.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A172	-

Summary

Statistics

Exons: 21, Coding exons: 19, Transcript length: 4,144 bps, Translation length: 767 residues

Version

ENSSSCT00000018946.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSSSCT00000018946.5 ATP6V0A1-203

Summary

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Transcript: ENSSSCT00000018946.5 ATP6V0A1-203

Summary

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