Transcript: ENSSSCT00000014210.5 CAPN1-203

Description

calpain 1 [Source:VGNC Symbol;Acc:VGNC:86170]

Location

About this transcript

This transcript has 21 exons, is annotated with 30 domains and features, is associated with 1739 variant alleles and maps to 9 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000014210.5	CAPN1-203	2596	775aa	ENSSSCP00000013824.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S6GBZ7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000059315.3	CAPN1-201	2650	653aa	ENSSSCP00000033221.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S6H4P7	-
ENSSSCT00000067293.2	CAPN1-202	2641	650aa	ENSSSCP00000067028.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UXC1 Q9N0M7	-

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 2,596 bps, Translation length: 775 residues

Version

ENSSSCT00000014210.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.